Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015857047.1_cds_XP_016513331.1_25887
CDS Infomation

[gene=LOC107830318] [db_xref=GeneID:107830318] [protein=tetratricopeptide repeat protein 7A-like] [protein_id=XP_016513331.1] [location=join(8721..8921,9327..9585,9776..10980,11171..11318,11417..11727)] [gbkey=CDS]
Sequence

ATGTTGTGTGCTTGTTCAGGAGAGCAATTTAAATTTGATGAGCCACCCCCACAGTCTCCA
GAGTCATTGGCCACTAGGGATTTCTCAGCCAGTGGCCTTTCTTCTAGAACTGGAACAGTA
GATTGGGATTCAAAACTTGAAGATGCTCAAGTTGATGAAGTTGAATCAACTTTGAAAGAG
GCACTTTCCTTGAATTATGAGGAAGCAAGAGCATTGCTGGGGAGGCTAGAATACCAAAGA
GGGAATTTTGATGCTGCCCTTCATGTGTTTCAGGGAATAGATATTAGAACCCTATCCTCG
AGAATGTCTAAGGCGATTGCTGAGAGAACGAGGCCCTTAAAACCGCGCTCCAAATGTGAT
ATTGTGCCTGCTGGTGTGATGTCATTGCATTCAGTGAGTCTACTTCTTGAAGCAATTTTG
CTCAAAGCTAAATCTTTAGAGGAGCTCAGCCGAATCAAAGATGCTGCTAAGGAATGCAAG
ATGATATTGGATGTTGTCGATTCAGCATTGCCGAATGGAATACCAGAGGGGATTTCTGAA
GACTGCAAGTTGCTGGAGATGTTTCATAAAGCGCTTGAGTTACTTCCAAAGTTATGGATA
CAAGCAGGGTATGTGGACGAAGCTGTGCTTGCATATCGAAGGGCTCTAGTCAAGCCATGG
AATTTGGATTCCCAAAGATTGGCCTGTATACAAAAGGACTTAGCTGCCACTTTACTCTTT
GGAGGGGTTGAAGTTGAGGTTCCTGCTCAATTTCAAGTGTCGGGTTCGACCTCCCCAAAA
AATAACTTGGAGGAAGCAATTCTCTTATTGTTTGTACTCATGAGCAAAATGCTAAATGGT
CAAATAGAATGGGATTCTGAAATTATGCACCATTTGACTTTCGCGCTGACAATTTCCGGC
CACTCTGAGTCTGTTGCAGATCATATTGAGCAGGTTTTACCAGGAATCTATACCCGATCT
GAGAGATGGTATCTTCTTGCGCTTTGTTACAGTGCTGCAGGTCAGAATGATACAGCGTTG
AATCTTGTCAAGAAAATTTCTGGATGTTCAGAAGCCAACCAAGAACCTCATATTCCGTCT
CTCTTGTTGGGAGCAAAGCTGTGTTCTCAGGATCTGCAGCAAGCCCATGAGGGGGTAAAT
TTTGCTCGTGCAGCACTTAACTCGGCGAAAAATCAGAACGAACATTTCCTAGTCCAGGCT
CATAAACTTCTTGGGATCTGCTATGGAAATGCTGCAAGAGTTTCCATTTCAGATTTTGAA
AGAAATTTCTGCCAAAGAGAAGCATTTGCTGCTTTAAACTCTGCTTTTGCAACTTGCAAG
GAGGATCCAGAAATTTTGTTTAGTCTAGGATTGGAAAATGCCATCCAAAGAAATTTGACT
CCAGCTTTTAATAATGGAATGCGGTACTCAGAAATGGTGGCTGGAAGCACGACGAGAGCT
TGGAAATTGTTGGCTTTAGTTGTTTCTGCAGAACAAAGATTCAAAGATGCGGAAGCCATA
GTTGATCTTGCTTTCGATGAGACTGGAAAGATTGACCAGATGGAATATCTCAGATTAAAA
GCTGTCCTGCAAATAGCTCAACAACAGCCCAAGCAAGCCATAGAGACGTACAGGATTCTG
TTGGCTTTGATTCAAGCACAACAGGAGTCCATGACAGATGATGAGGTAACATTTCAGAGA
AGATTGGAAGTTGAAGCATGGCTTGATTTATCAAGGTTATACACAGATCTAGAGTCATGG
CGTGATGCCGAAATATGTATAAACAAAGCCAAAGCAATTCAATTTTACTGCCCTCGGAGC
TGGCATGCAACAGGTGCACTATTTCAAGCCAAAGCAAGAGATAAGGAAGCACTTGTTGCA
TTCTCAATTTCTCTATCAATAGAACCAGATTATATCCCTAGTATTGTTTCCACGGCTCAA
GTGCTTATGAAGATGGGAGACGACACAGTCCCTATTGCTAGAAGCTTTTTGATGAATGCT
CTGCGATTAGAACCCACAAATCATGATGCATGGTTTAGCCTTGGAATGCTTGCAAAAACG
GAAGGCTCACTGCAGCAAGCGGCAGATTTTTTCCAAGCTGCACATGAGTTGAAGCTTTCT
GCTCCAGTTCAAAGTTTTGTCTGA

Peptide Sequence

PEP ID

XP_016513331.1
PEP Infomation

PREDICTED: tetratricopeptide repeat protein 7A-like [Nicotiana tabacum]
Sequence

MLCACSGEQFKFDEPPPQSPESLATRDFSASGLSSRTGTVDWDSKLEDAQVDEVESTLKE
ALSLNYEEARALLGRLEYQRGNFDAALHVFQGIDIRTLSSRMSKAIAERTRPLKPRSKCD
IVPAGVMSLHSVSLLLEAILLKAKSLEELSRIKDAAKECKMILDVVDSALPNGIPEGISE
DCKLLEMFHKALELLPKLWIQAGYVDEAVLAYRRALVKPWNLDSQRLACIQKDLAATLLF
GGVEVEVPAQFQVSGSTSPKNNLEEAILLLFVLMSKMLNGQIEWDSEIMHHLTFALTISG
HSESVADHIEQVLPGIYTRSERWYLLALCYSAAGQNDTALNLVKKISGCSEANQEPHIPS
LLLGAKLCSQDLQQAHEGVNFARAALNSAKNQNEHFLVQAHKLLGICYGNAARVSISDFE
RNFCQREAFAALNSAFATCKEDPEILFSLGLENAIQRNLTPAFNNGMRYSEMVAGSTTRA
WKLLALVVSAEQRFKDAEAIVDLAFDETGKIDQMEYLRLKAVLQIAQQQPKQAIETYRIL
LALIQAQQESMTDDEVTFQRRLEVEAWLDLSRLYTDLESWRDAEICINKAKAIQFYCPRS
WHATGALFQAKARDKEALVAFSISLSIEPDYIPSIVSTAQVLMKMGDDTVPIARSFLMNA
LRLEPTNHDAWFSLGMLAKTEGSLQQAADFFQAAHELKLSAPVQSFV

Transcript Sequence

Gene sequence data has not been registered.